CDS

Accession Number TCMCG010C08689
gbkey CDS
Protein Id XP_016561433.1
Location join(160180195..160180248,160180880..160181065,160181973..160182078,160182542..160182678,160182828..160182911,160183028..160183122,160183207..160183315,160183464..160183550,160183627..160183719,160183885..160184082,160184167..160184312,160184402..160184546,160184635..160184730,160184821..160184994,160185950..160186028,160186205..160186332)
Gene LOC107860552
GeneID 107860552
Organism Capsicum annuum

Protein

Length 638aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016705947.1
Definition PREDICTED: FACT complex subunit SSRP1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category BKL
Description Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09272        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGACGGACGGTCACTTGTTCAACAACATCTCCCTCGGCGGCCGTGGAGGCACTAATCCAGGGCAGCTCAAGGTTCAGTCTGGAGGTATATTATGGAAGAAACAAGGTGGTGGTAAGGCTGTGGAAGTGGACAAGGACGATATAGTGGGCCTTACTTGGATGAAAGTTCCTCGAACTAATCAGCTGGGTGTGCGGATTAAGGATGGTCTTTATTACAAATTTACTGGCTTTCGCGACCAGGATGTTTCGAGTTTGAACACCTATTTCCAGAATTCTTGCGGGATATCTCCAGAGGAGAAGCAGCTATCAATTAGTGGAAAAAATTGGGGAGAAGTTGATCTAAATGGGAATATGCTTTCTTTTCTTGTTGGTTCTAAGCAAGCATTTGAGATATCACTAGCAGATGTTTCTCAAACACAGCTTCAAGGAAAAAATGATGTCATGTTGGAGTTCCATGTAGATGATACAACTGGGGCTAATGAGAAAGACTCGTTGATGGAAATCAGCTTTCACATCCCTAATTCAAACACTCAATTTGTTGGTGATGAAAACCGACCTCCTGCTCAAGTTCTTCGTGACAAAATCATGTTAATGGCTGATGTCGGTGCTGGAGGTGAGGAAGCTGTTGTCACATTTGATGGCATTGCCATACTTACTCCAAGGGGTCGTTATAATGTTGAACTTCATCTCTCATTTTTGCGTTTACAAGGACAAGCCAATGACTTTAAAATTCAGTACAGCAGCGTCGTCCGTATTTTTTTGTTGCCGAAGCATAACCAACCGCACACTTTAGTAGTTATCACTCTTGATCCTCCAATTAGGAAGGGCCAAACTTTGTATCCGCACATTGTATTGCAGTTTGAGACAGACAATGTGGTGGACCTTTCGCTGGCTTTAAGTGAAGATCTTTTAAATACGAAATATAAGGATAGGCTGCTTACAGGTTACAAGGGTCTAATCCATGACATCTTTACTCAAATATTACGTGGCTTGTCTGGTGCCAAAGTCACTAAACCAGGGAAGTTCCGTAGCAGTCAAGATGGGTATGCGGTGAAGTCCTCATTGAAAGCTGAAGATGGACTCCTCTATCCTCTTGAGAAGAGCTTCTTCTTTTTACCTAAACCACCAACTCTTATACTGCATGAGGAGATTGATTATGTGGAGTTTGAGAGGCACGCTGCGGGAACAGCCAACATGCATTACTTTGATCTTCTCATTAGACTGAAGACCGAGCAAGAACATCTTTTCCGGAATATCCAGAGAAATGAGTACCACAATCTTTTTGATTTCATCAGTGGAAAGGGTCTGAAAATAATGAACCTTAACGAAGCCCGGGCTACAGAAGGTGTTCCGGTGTTGCCCGATGATGACGATGATGCCGTTGATCCACATCTCGAGCGTATTAAGAATGAAGCAGGTGGAGATGATAGTGATGAAGAGGACGAAGATTTTGTCCTTGATAAGGATGATGGAGGGTCTCCTACTGATGAGTCTGGAGGGGATGATTCTGATGCCAGTGCTAGTGGCGGCGAGGAGAAACCTGCAAAAAAGAAGCCCAAAAAGGATGCTACTGTGTCAAAGCCATCTTCAAGCAGGAAAAAGGCAGACGATGATGGATTGAAGAAGAAAAAACCGAAAAAGAAGAAGGATCCAAATGCCCCGAAGAGGGCAATTAGTGCTTTCATGTTTTTCTCGCAGAATGAAAGAGAGAATGTGAAGAGAAGTAATCCTGGAATCTCCTTCACTGAGGTTGGGAAGGTTCTTGGAGAGAGATGGAATAAGCTGTCAGCCGAGGAGAAAGAACCCTTTGAGGCAATGGCCAAGGCAGATAAGAAACGATACACCGAGCAGATCAGTGGTTACAAGAGCGCTCAGCCGACTGCCATGGATTCAGGGGATGAATCTGGGAGTTCGTAA
Protein:  
MTDGHLFNNISLGGRGGTNPGQLKVQSGGILWKKQGGGKAVEVDKDDIVGLTWMKVPRTNQLGVRIKDGLYYKFTGFRDQDVSSLNTYFQNSCGISPEEKQLSISGKNWGEVDLNGNMLSFLVGSKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENRPPAQVLRDKIMLMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALSEDLLNTKYKDRLLTGYKGLIHDIFTQILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDGLLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLNEARATEGVPVLPDDDDDAVDPHLERIKNEAGGDDSDEEDEDFVLDKDDGGSPTDESGGDDSDASASGGEEKPAKKKPKKDATVSKPSSSRKKADDDGLKKKKPKKKKDPNAPKRAISAFMFFSQNERENVKRSNPGISFTEVGKVLGERWNKLSAEEKEPFEAMAKADKKRYTEQISGYKSAQPTAMDSGDESGSS